Detailed information of OS493_034204-T1 in Lophelia pertusa

Genomic Location: scaffold_284:402242...407367
NR annotation: KAJ7382568.1, peroxisome assembly protein (Peroxin-2) [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P24392Peroxisome biogenesis factor 2 OS=Rattus norvegicus OX=10116 GN=Pex2 PE=2 SV=1
E7F4V8Peroxisome biogenesis factor 2 OS=Danio rerio OX=7955 GN=pex2 PE=3 SV=1
Q06438Peroxisome biogenesis factor 2 OS=Cricetulus griseus OX=10029 GN=PEX2 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04757Pex2_Pex12Pex2 / Pex12 amino terminal regionFamilyInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045859DomainPeroxisome biogenesis factor 2, HC subclass-RING finger domainInterproscan
IPR006845DomainPex, N-terminalInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR025654FamilyPeroxisome biogenesis factor 2/10Interproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48178PEROXISOME BIOGENESIS FACTOR 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005778Cellular Componentperoxisomal membraneInterproscan
GO:0007031Biological Processperoxisome organizationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016558Biological Processprotein import into peroxisome matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06664PEX2, PXMP3; peroxin-2-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_034204-T1 global co-expression network
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