Detailed information of OS493_034136-T1 in Lophelia pertusa

Genomic Location: scaffold_282:272161...295825
NR annotation: KAJ7321749.1, smg-9, nonsense mediated mRNA decay factor [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B5X165Nonsense-mediated mRNA decay factor SMG9 OS=Salmo salar OX=8030 GN=smg9 PE=2 SV=1
Q05AW9Nonsense-mediated mRNA decay factor SMG9 OS=Xenopus laevis OX=8355 GN=smg9 PE=2 SV=1
B5DDX6Nonsense-mediated mRNA decay factor SMG9 OS=Xenopus tropicalis OX=8364 GN=smg9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
----------

 InterPro
InterPro termTypeDescriptionSource
IPR039177FamilyNonsense-mediated mRNA decay factor SMG9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14270UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

Expression pattern
 Expression trend for OS493_034136-T1 global co-expression network
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