Detailed information of OS493_034015-T1 in Lophelia pertusa

Genomic Location: scaffold_279:271548...280351
NR annotation: KAJ7376559.1, Dynein regulatory complex subunit 6 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8CDU4F-box and leucine-rich repeat protein 13 OS=Mus musculus OX=10090 GN=Fbxl13 PE=1 SV=2
Q8NEE6F-box and leucine-rich repeat protein 13 OS=Homo sapiens OX=9606 GN=FBXL13 PE=1 SV=3
Q9QZH7F-box/LRR-repeat protein 20 OS=Rattus norvegicus OX=10116 GN=Fbxl20 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|F-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937F-box-likeF-box-likeDomainInterproscan
PF08457Sfi1Sfi1 spindle body proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001810DomainF-box domainInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR039588FamilyF-box only protein 4Interproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR013665DomainSfi1 spindle bodyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16008F-BOX ONLY PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan

Expression pattern
 Expression trend for OS493_034015-T1 global co-expression network
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