Detailed information of OS493_033915-T1 in Lophelia pertusa

Genomic Location: scaffold_277:237005...240931
NR annotation: KAJ7389056.1, Rad2 nuclease [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q803U7Exonuclease 1 OS=Danio rerio OX=7955 GN=exo1 PE=2 SV=1
Q9UQ84Exonuclease 1 OS=Homo sapiens OX=9606 GN=EXO1 PE=1 SV=2
Q9QZ11Exonuclease 1 OS=Mus musculus OX=10090 GN=Exo1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00867XPG_IXPG I-regionFamilyInterproscan
PF00752XPG_NXPG N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006086DomainXPG-I domainInterproscan
IPR019974Conserved_siteXPG conserved siteInterproscan
IPR006085DomainXPG, N-terminalInterproscan
IPR006084FamilyXPG/Rad2 endonucleaseInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR044752DomainExonuclease 1-like, PIN-like domainInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11081FLAP ENDONUCLEASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0016788Molecular Functionhydrolase activity, acting on ester bondsInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0017108Molecular Function5'-flap endonuclease activityInterproscan
GO:0035312Molecular Function5'-3' DNA exonuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02510hpaI, hpcH; 4-hydroxy-2-oxoheptanedioate aldolaseEC:4.1.2.52
Tyrosine metabolismko00350deepkoala

Expression pattern
 Expression trend for OS493_033915-T1 global co-expression network
TOP