Detailed information of OS493_033869-T1 in Lophelia pertusa

Genomic Location: scaffold_276:59849...63831
NR annotation: KAJ7321761.1, 5-methylcytosine rRNA methyltransferase nsun4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V8R75-cytosine rRNA methyltransferase NSUN4 OS=Bos taurus OX=9913 GN=NSUN4 PE=2 SV=2
Q9CZ575-cytosine rRNA methyltransferase NSUN4 OS=Mus musculus OX=10090 GN=Nsun4 PE=1 SV=1
Q96CB95-cytosine rRNA methyltransferase NSUN4 OS=Homo sapiens OX=9606 GN=NSUN4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22808NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21970NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4EC:2.1.1.-
Mitochondrial biogenesisko03029deepkoala

Expression pattern
 Expression trend for OS493_033869-T1 global co-expression network
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