Detailed information of OS493_033818-T1 in Lophelia pertusa

Genomic Location: scaffold_274:324915...326169
NR annotation: KAJ7370193.1, E3 ubiquitin-protein ligase Zswim2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9M622Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMR1 PE=1 SV=1
Q8LFY8RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2
Q9SLC4RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46539E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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Expression pattern
 Expression trend for OS493_033818-T1 global co-expression network
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