Detailed information of OS493_033688-T1 in Lophelia pertusa

Genomic Location: scaffold_272:70604...98404
NR annotation: KAJ7382632.1, hypothetical protein OS493_033688 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5THJ4Intermembrane lipid transfer protein VPS13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2
Q9VU08Intermembrane lipid transfer protein Vps13D OS=Drosophila melanogaster OX=7227 GN=Vps13D PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627UBAUBA/TS-N domainDomainInterproscan
PF06650VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF16910VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940DomainUbiquitin-associated domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR009543DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR031642DomainVPS13, middle RBG modulesInterproscan
IPR041969DomainIntermembrane lipid transfer protein VPS13D, UBA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan

Expression pattern
 Expression trend for OS493_033688-T1 global co-expression network
TOP