Detailed information of OS493_033482-T1 in Lophelia pertusa

Genomic Location: scaffold_266:405322...417684
NR annotation: KAJ7382690.1, Rho guanine nucleotide exchange factor 26 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5BKC9Ephexin-1 OS=Rattus norvegicus OX=10116 GN=Ngef PE=1 SV=2
Q5RDX5Ephexin-1 OS=Pongo abelii OX=9601 GN=NGEF PE=2 SV=1
Q8N5V2Ephexin-1 OS=Homo sapiens OX=9606 GN=NGEF PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF00169PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000219DomainDbl homology (DH) domainInterproscan
IPR047270DomainEphexin-like, PH domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR047271FamilyEphexin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12845GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07525NGEF, EPHEXIN, ARHGEF27; neuronal guanine nucleotide exchange factor-Membrane traffickingko04131deepkoala

Expression pattern
 Expression trend for OS493_033482-T1 global co-expression network
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