Gene detail

Detailed information of OS493_032970-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_032970-T1	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	scaffold_252	441131	459601	-

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_032970-T1

ATGACGAAAGGAGGCTTGTCCGATGGCCATTGTACGCGAACCAAGAACTACATGAGACACTACCATGATTGTACTTCACGGCTATTTTCCAATGGAAGGGCAGACGATTATCTGAACGAACTTTTCTTGAATGCAGCGAAGAATGGTGATTTCGAAAGGGTGCAGAACTTCCTCGCCCGTACATCAAGAAACACGTCTGTTAACGTGGATGCTAAAGACAAGGAAGGTGGTTATACTGCAGTCATGCTTGCTGCAATGAATGAACATGAGAAGGTAGTATCATTGTTGCTAAACTATGGAGCAGACATAACTTTGTGTAACAGCAGAGGGCAGTCAGTCCTGGATTTTGCATCAGACTCAATGAGACCCCTGCTTCTAGGTTCTGTTACAAGGCAAGGGTATTCATCTCGTCATTTACTGCAGGCAGCTTGGCAAGGAAATTCTCAACTGGTGAAGAAGTTGCTGTCATCCAAATCTTTGCTGGATGTGAACTGTAAGAATGCCGATGGTTTGACGCCTCTTCTTTTAGTCACCAGAGATTTGAACCTCTTTGAGAAAATCGAGAAAGCTGTTATGGAGAATGGTTATCACCCAGTGGAAGTTGTCAAGGAACTGATTCATCACAATGCTGACTGTGGTGCCAAGGACAGTGAAGGCAAAAGACCTCTTCACTTTGCAGCTCATGGTAAAGGAAACTTTGCCAGGCATGTTGTTGATGTCCTGATCGAGAAGGGTGCAAGTGAAATTGATATGCCAGATAGATTCAGCAACTCCCCCCTGCACTGGGCAACCATAGAGGACAATCAGCCTATCCTACTGGCTCTTATCAAGGGGGCTTCTCATGGATTTGGGAGAACATCTGATACTCTTCTGCATCATGGAGCGGATGTTACCATTACAGATGACAATGGTCTGTCACCTGTTGATGTAGCAAAGGGCAGACGAGTTCAAGTGGTTCTCAAAGATGCTTGGGCGGAACAAACCAAAGATAATAAACTTCACTCCAAGAGGATCTTATCAGCTCCAGTTCCACCACACATTCAACAAGACTCAGTTCAGCCAAGCCCTGAAGTGACTGAACAGAAACAACAAGCGGAGCAGGTTACTGTGCTGTCAGAATCTATCCACACTTCTCTAAAGGATTCAACTATTCGGATCAGTACTGCCCCATCACAAGGAGTAGAGAGAAAACTAAAGAAAAGGTCGCAGAATTCCGTAGAAGAGACCTCTTTGCTTGATGAAAGAACCAGCATTCCATCTTCAAGGAAAATGTCCGATGTACGCATGCCTAGAATTGCCTCAGCTCAGAAAACTGAGTTATCCCCAGGTCCCAGATCTACATATAACTCTGGGTCTGTTAGCAGAGTGCAGTCCGGAAAACAAGAACTTGGAATAAAAGACATGCAAACTTCAGTGGCACTTCCAAGTTTGTCTGTTCTTAACATCGAGCTGACTTGCTTCAGAAATCTACGTGGCGAGAAACAAGTATCGCGGAACCGAAGGACATCTTCCCAGCTGCCTTCGCCACCAAACTATCGCCTACGTCATCGACTCTCGAGCCCAGTCCTCACGTATCAACGCAGGATCTCTCCTCCAGGAACGCCTGGCAACGAAATCCATAACAACACCAGAACTGCTCAAGAGAATATCACGTTTGTACCAGAAATCGTCGATCTTGATCTGCTCAGCAAGGAAGGACTTCTCTCTGGTGGGGTAGCTTCATCAGTGTTCCTATCATCAGAAATAGGAGAAGTCGCACCTCCTCCACCATCTCCACGCGTGGAGTCACGCTACTCGAACAGAAGCCAGGAAAACAGGGAACTGACACCGACGCAGGCGTCTGACGACGAAACGGACATGACACGGACGTTTACATCAATCCCGCGGTCTACATTTTGGATCCCCGTGGGTGAAAACGATACTGAAAAGAACGAGCCACCCAGCGTTGAAAAGGATGAAGAATCGTCTTCAAACGGGACACAATTTTATATTGATCTTAGTAACTTAGAGGCTCTGGCCTTGGGACAGTGCTCCTTATGCGGGACATCCCTTCCCGAGAGAACACCCGCGTCAAGACGAGACTCGATATCATCGAGTCCCGACAAAGAAATGTGCAAGTCTTGTAAACCCTGTCGGGGATCAAACGAGGACGTTTTCTGGATTCCATTTACCGAGAAGAGAAAGGCTTCTGCCTTGAAAAATCTTAACGGAGTGGAAAACGGAGACGACAGCGCGAAACCGAACGCTAGGAGAAAATCGAATGAGCAAAACAATACAGAGGATCGTGTACAAAGGAAAAGCATGATTCAACTTCTGAAAGACTTGTCTTCATCGTCAAATGCTGTTGAAGAATCAACTACAGATTATGGTAAAATTGTTAAGACAGTAGGCGAGGTAAGCTCTTTGGCGGAATCCACTGTCATCGCTCGCCCAACAAATGGCTCTGCTCCTCCAACACGAGCGATTGTCGCTTCTAAAAATAAATCACTAGCGAAGAAGGAAAATGACATTATTCTAAAATCGTTTTCTGAAACTGATATTCATAATCCTGTTGCTGTTGCGCCGTCAAGTAAAACAACATTAAGAAATACTGAAGAGAAGGAGCATGTCTCAGGCGAGGTGCGTCAGAGAGGACCTTCACAAGATACTAAATTGCCTCACACACAAGAGGCCCTAAATGAGACTGGTCACGACAGTGCCATTTTAAATACAACAGTGGAACCCAGTCCGCCAAAACAAGCATGGACGACACCCAGGTCAGAGGAGCCTGGCGCTAGTAGCGTGACAATTATAAACGCATATCCATCGCCTGTACCACCCGTGGACAAGTCTGCTATCCATCCTCCTATCGGACCAGCGACTGCAAATAAAAAGTTAACAAGCGGGAAGAAAGGAAAGAAAGGAGGAAAACCAGCGAGTAACTCGACGAAAACTGCTAAACCAAGGACCAAAAGCAAAGTATCGGAACAAAACGGCAAAGGTGGTAAAAAGAAAGGGAAAGCAAAAAAGAAAGGTGACATGAAAATGATCACGGTACAGCAAAGGGAAGCCGGGGAAGAACTCGGGCTTAGAATGATATCACAGGGAGGTTTGGATGTAGCCGAGGAGTCTATGGATTATCTTTCCACGTTCCGTCCTTTCAACGCGCGGATGCTTAAGGGAAAGCACGCCATTTTGAGCCCGATACCGGAGTCCCCTCGGAGTACAAGAAATAGCCCTCGGAGTACAGTAAGTACCCCACGGGTCGTCGACTTTGCTGCGAGCCTAAGAGAGGATAACACCCAGGTTCAAGAGCGGAATGCTAAAGGCCTCTCCGATGTAGGAGCTATGGGCGAAGGAGTTCCGGAGAATTCCGAGGGAGTAGCGAGGGAAGGCGAATTTGACGTTGTAGACGGAGGGATGTTTAGTAGGGTAATTGGAATGTGTGTGCCTCGGCTAAAGTTTGGTAAATCTGACTTGTCGGGATCAGATGAAGAATGTAGCGAACCGCTTCTTAAGCACCCCCATGGTGGTGGGGTCGGGAAACAGCAGCGGGAGCCTGTTGAAACGAGGAGCACTGAAGATAGGTTACGTGTCGAGCAAGGCGGTGAGTACCAACAGGTCATACAGGATGAAGCTGATGACGTCATGGAGGATCTTATCAGGCGTGGGCTCAGTTTAGAGGAAGAAAGAGAAGGGAATGGGACACAGTTCGATCAACACTCCGATTCACGGAGTCGCTTCACCACAGACGATTCCTTGACAAATGTAACAAGTCATTCAAGCTCGAGTTTATCACAAGTAAAAACTAGCGAAGAATCATCGGTTTTAACTTACCGATATTCCACAGAAGTTCCTGCCGAGTCGGACTTGGCGAATGAAGAACCAACATCAGACATGAGCTCGTACTCGGAGCAATATTCAGACACGGACTCGTCATATAACAGTTGCGGTTCGACCTCACCACGCCCTCTCTCGCCAGCGTCTTCGCTAAACAGTAGCGATACGTATTTCTCCTCGCCACGTGACTCCTCGTGCACAGACACGCCCACCCCAGACCGAGACATGTACTCTGAAAATTCGGTCGAAATCGAATATTACGAGCGAATGACGAGAGAAAAGTCGGGCATCAGCAGCAGTAGTAGCAGCAGCTCAACAATCCGCACGCAGTCTAACGCCTCACGTGGCAGTGTGGGTAATATTTCCCAGGGTTCTGTGGGGAGTTTAGCTGAGAACGTGGTGCGGAGTCGACTCAGTGCGTCTTCTCGTAGCTCGGAACAACGTAGCCAGTCCTCCGCGAGTTGTGAAGAGGAGATTTTTTGGAAGAAAGGGAACGTGCTTGGAAGAGGAGCGTTTGGAACGGTTTGGTGCGGACTCACAAACACGGGAGAGATGATCGCAGTGAAACAGGTGGAACTGAACCACAGCAATATAGACGAGGCGGAAGAGCAATACGAGAAACTCCAGGAGGAAGTGTTTCTACTGAAGTCTCTCAAACACAAAAACATCGTCAAGTTCATAGGCACCTGTTTAGATGGGGGCGTGGTAAACATCTTCATGGAGTACGTGCCAGGGGGCTCCATCGCCTCCATACTTGCACGATTTGGATGTCTTGATGAGCCCGTGTTCAGGCGTTACACTAAGCAACTGTTGTCAGGCGTGTCCTATCTCCATGGCAACAACGTCATTCATAGAGATATCAAAGGTGGAAACATACTGGTCATGCCGAGCGGAGTTCTAAAGTTAATCGACTTTGGTTGCGCTAAACGCCTTTACATGAATCTCAGCATGAGTAGAAGCAATATTCTTCGCTCCATGAAGGGCACGCCCTACTGGATGGCGCCCGAGGTCATTCGGGAGACTGGGCACGGCCGAAAGTCTGACATATGGAGTGTAGGCTGTACCGTGTTTGAGATGGCAACTGGAAAACCTCCATGGTCCGATATGCCTCCCATGGCAGCCATCTTTGCTATTGGAAGTGGCTCGTTAGCGGTGCCGCATTTAGGAGAGGATTTCTCGCCAGGTGCTCGGGACTTCGTCGACAAGTGTCTGACGAGGGACCCAGATTTGCGGCCCTCAGCCGATGAGCTCCTTCAGCACTACTTCTTAAAGGACCCCTTATAA

Transcript

OS493_032970-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050538	Family	Mitogen-activated protein kinase kinase kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48016	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_032970-T1 global RNA-seq network