Detailed information of OS493_032937-T1 in Lophelia pertusa

Genomic Location: scaffold_252:64005...73290
NR annotation: KAJ7322756.1, tRNA (cytosine-5-)-methyltransferase [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O55055tRNA (cytosine(38)-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Trdmt1 PE=1 SV=2
O14717tRNA (cytosine(38)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=TRDMT1 PE=1 SV=1
Q7YS61tRNA (cytosine(38)-C(5))-methyltransferase OS=Bos taurus OX=9913 GN=TRDMT1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00145DNA_methylaseC-5 cytosine-specific DNA methylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR001525FamilyC-5 cytosine methyltransferaseInterproscan
IPR031303Conserved_siteDNA methylase, C-5 cytosine-specific, conserved siteInterproscan
IPR050750FamilyCytosine-specific C5-methyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46098TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15336TRDMT1, DNMT2; tRNA (cytosine38-C5)-methyltransferaseEC:2.1.1.204
Transfer RNA biogenesisko03016deepkoala

Expression pattern
 Expression trend for OS493_032937-T1 global co-expression network
TOP