Detailed information of OS493_032824-T1 in Lophelia pertusa

Genomic Location: scaffold_249:547760...556252
NR annotation: KAJ7376763.1, hypothetical protein OS493_032824 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4VC33E3 ubiquitin-protein transferase MAEA OS=Mus musculus OX=10090 GN=Maea PE=1 SV=1
Q5RKJ1E3 ubiquitin-protein transferase MAEA OS=Rattus norvegicus OX=10116 GN=Maea PE=2 SV=2
Q7L5Y9E3 ubiquitin-protein transferase MAEA OS=Homo sapiens OX=9606 GN=MAEA PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10607CTLHCTLH/CRA C-terminal to LisH motif domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006594Conserved_siteLIS1 homology motifInterproscan
IPR006595DomainCTLH, C-terminal LisH motifInterproscan
IPR044063DomainGid-type RING finger domainInterproscan
IPR024964DomainCTLH/CRA C-terminal to LisH motif domainInterproscan
IPR013144DomainCRA domainInterproscan
IPR045098FamilyFyv10 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0034657Cellular ComponentGID complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18624MAEA, EMP; macrophage erythroblast attacher-Cytoskeleton proteinsko04812deepkoala

Expression pattern
 Expression trend for OS493_032824-T1 global co-expression network
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