Detailed information of OS493_032803-T1 in Lophelia pertusa

Genomic Location: scaffold_249:182509...185362
NR annotation: KAJ7376745.1, hypothetical protein OS493_032803 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5SWK7RING finger protein 145 OS=Mus musculus OX=10090 GN=Rnf145 PE=1 SV=1
Q96MT1RING finger protein 145 OS=Homo sapiens OX=9606 GN=RNF145 PE=1 SV=2
Q0IJ20RING finger protein 145 OS=Xenopus tropicalis OX=8364 GN=rnf145 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13705TRC8_NTRC8 N-terminal domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050731FamilyHRD1 family E3 ubiquitin-protein ligasesInterproscan
IPR025754DomainTRC8-like, N-terminal domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR011016DomainZinc finger, RING-CH-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22763RING ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23789RNF145; E3 ubiquitin-protein ligase RNF145EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_032803-T1 global co-expression network
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