Detailed information of OS493_032708-T1 in Lophelia pertusa

Genomic Location: scaffold_247:359750...364996
NR annotation: KAJ7389240.1, hypothetical protein OS493_032708 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042622FamilyZinc finger protein 106Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14435ZINC FINGER PROTEIN 106Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0017124Molecular FunctionSH3 domain bindingInterproscan

Expression pattern
 Expression trend for OS493_032708-T1 global co-expression network
TOP