Detailed information of OS493_032378-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_032378-T1GLUTAMINE-TRNA LIGASEscaffold_239500427504949-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03950tRNA-synt_1c_CtRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan
PF20974tRNA-synt_1c_C2tRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011035Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyInterproscan
IPR020056Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalInterproscan
IPR020059DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domainInterproscan
IPR049437DomaintRNA synthetases class I (E and Q), anti-codon binding domainInterproscan
IPR050132FamilyGlutamine/Glutamate--tRNA LigaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43097GLUTAMINE-TRNA LIGASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004818Molecular Functionglutamate-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006424Biological Processglutamyl-tRNA aminoacylationInterproscan
GO:0017102Cellular Componentmethionyl glutamyl tRNA synthetase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_032378-T1 global RNA-seq network
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