Detailed information of OS493_032101-T1 in Lophelia pertusa

Genomic Location: scaffold_233:243584...249404
NR annotation: KAJ7353827.1, ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62217Semaphorin-5A OS=Mus musculus OX=10090 GN=Sema5a PE=2 SV=1
Q13591Semaphorin-5A OS=Homo sapiens OX=9606 GN=SEMA5A PE=1 SV=3
D3ZTD8Semaphorin-5A OS=Rattus norvegicus OX=10116 GN=Sema5a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR000082DomainSEA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005112Molecular FunctionNotch bindingInterproscan

Expression pattern
 Expression trend for OS493_032101-T1 global co-expression network
TOP