Detailed information of OS493_032042-T1 in Lophelia pertusa

Genomic Location: scaffold_232:265340...271707
NR annotation: KAJ7370477.1, H/ACA ribonucleoprotein complex non-core subunit naf1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9VJ62H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Drosophila melanogaster OX=7227 GN=CG10341 PE=1 SV=2
O14360H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=naf1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04410Gar1Gar1/Naf1 RNA binding regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007504FamilyH/ACA ribonucleoprotein complex, subunit Gar1/Naf1Interproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR040309FamilyH/ACA ribonucleoprotein complex non-core subunit Naf1Interproscan
IPR038664Homologous_superfamilyH/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31633H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0000493Biological Processbox H/ACA snoRNP assemblyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005732Cellular Componentsno(s)RNA-containing ribonucleoprotein complexInterproscan

Expression pattern
 Expression trend for OS493_032042-T1 global co-expression network
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