Detailed information of OS493_031675-T1 in Lophelia pertusa

Genomic Location: scaffold_223:347252...351927
NR annotation: KAJ7389431.1, S-methyl-5-thioribose-1-phosphate isomerase [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B4K8A4Methylthioribose-1-phosphate isomerase OS=Drosophila mojavensis OX=7230 GN=GI10562 PE=3 SV=1
A9JRE2Methylthioribose-1-phosphate isomerase OS=Danio rerio OX=7955 GN=mri1 PE=2 SV=1
A7RF00Methylthioribose-1-phosphate isomerase OS=Nematostella vectensis OX=45351 GN=v1g237765 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01008IF-2BInitiation factor 2 subunit familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005251FamilyMethylthioribose-1-phosphate isomeraseInterproscan
IPR027363Homologous_superfamilyMethylthioribose-1-phosphate isomerase, N-terminalInterproscan
IPR011559FamilyInitiation factor 2B alpha/beta/deltaInterproscan
IPR042529Homologous_superfamilyInitiation factor 2B-like, C-terminalInterproscan
IPR000649FamilyInitiation factor 2B-relatedInterproscan
IPR037171Homologous_superfamilyNagB/RpiA transferase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43475METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0044249Biological Processobsolete cellular biosynthetic processInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0019509Biological ProcessL-methionine salvage from methylthioadenosineInterproscan
GO:0046523Molecular FunctionS-methyl-5-thioribose-1-phosphate isomerase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08963mtnA; methylthioribose-1-phosphate isomeraseEC:5.3.1.23
Cysteine and methionine metabolismko00270deepkoala

Expression pattern
 Expression trend for OS493_031675-T1 global co-expression network
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