Detailed information of OS493_031624-T1 in Lophelia pertusa

Genomic Location: scaffold_222:153078...161141
NR annotation: KAJ7323427.1, WD repeat-containing protein 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9V3J8Protein will die slowly OS=Drosophila melanogaster OX=7227 GN=wds PE=1 SV=1
Q2KIG2WD repeat-containing protein 5 OS=Bos taurus OX=9913 GN=WDR5 PE=2 SV=1
P61964WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=WDR5 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14963WDR5, SWD3, CPS30; COMPASS component SWD3-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_031624-T1 global co-expression network
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