Detailed information of OS493_031341-T1 in Lophelia pertusa

Genomic Location: scaffold_214:466365...478015
NR annotation: KAJ7370605.1, hypothetical protein OS493_031341 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RFK6Recombining binding protein suppressor of hairless OS=Pongo abelii OX=9601 GN=RBPJ PE=2 SV=1
P31266Recombining binding protein suppressor of hairless OS=Mus musculus OX=10090 GN=Rbpj PE=1 SV=1
Q3SZ41Recombining binding protein suppressor of hairless OS=Bos taurus OX=9913 GN=RBPJ PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09270BTDBeta-trefoil DNA-binding domainDomainInterproscan
PF20144TIG_SUHTIG domainDomainInterproscan
PF09271LAG1-DNAbindLAG1, DNA bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038007DomainRBP-Jkappa, IPT domainInterproscan
IPR015351DomainRBP-J/Cbf11/Cbf12, DNA bindingInterproscan
IPR015350DomainBeta-trefoil DNA-binding domainInterproscan
IPR037095Homologous_superfamilyRBP-J/Cbf11, DNA binding domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036358Homologous_superfamilyBeta-trefoil domain superfamilyInterproscan
IPR040159FamilySuppressor of hairless-likeInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10665RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001228Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specificInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06053RBPSUH, RBPJK; recombining binding protein suppressor of hairless-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_031341-T1 global co-expression network
TOP