| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_031113-T1 | LYSINE-SPECIFIC DEMETHYLASE | scaffold_210 | 60263 | 82087 | + |
| CDS | |||||
| OS493_031113-T1 | |||||
| Transcript |
| OS493_031113-T1 |
| Protein |
| OS493_031113-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00515 | TPR_1 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF02373 | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| PF13431 | TPR_17 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR051630 | Family | Transcriptional Corepressor and Histone Demethylase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14017 | LYSINE-SPECIFIC DEMETHYLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:0031490 | Molecular Function | chromatin DNA binding | Interproscan |
| GO:0044666 | Cellular Component | MLL3/4 complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_031113-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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