Detailed information of OS493_031113-T1 in Lophelia pertusa

Genomic Location: scaffold_210:60263...82087
NR annotation: KAJ7323700.1, Lysine-specific demethylase 6A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15550Lysine-specific demethylase 6A OS=Homo sapiens OX=9606 GN=KDM6A PE=1 SV=2
O70546Lysine-specific demethylase 6A OS=Mus musculus OX=10090 GN=Kdm6a PE=1 SV=2
P79457Histone demethylase UTY OS=Mus musculus OX=10090 GN=Uty PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347DomainJmjC domainInterproscan
IPR051630FamilyTranscriptional Corepressor and Histone DemethylaseInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14017LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11447UTX, KDM6A; lysine-specific demethylase 6AEC:1.14.11.68
Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_031113-T1 global co-expression network
TOP