Detailed information of OS493_030901-T1 in Lophelia pertusa

Genomic Location: scaffold_205:334934...360408
NR annotation: KAJ7389516.1, Swi SNF matrix associated, actin dependent regulator of chromatin [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E1BB03DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus OX=9913 GN=ZRANB3 PE=3 SV=3
Q6NZP1DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus OX=10090 GN=Zranb3 PE=1 SV=1
Q5FWF4DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens OX=9606 GN=ZRANB3 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF01844HNHHNH endonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002711DomainHNH endonucleaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR003615DomainHNH nucleaseInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45766DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006281Biological ProcessDNA repairInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0048478Biological Processobsolete replication fork protectionInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

Expression pattern
 Expression trend for OS493_030901-T1 global co-expression network
TOP