| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_030611-T1 | PLEXIN | scaffold_199 | 446460 | 566192 | - |
| CDS | |||||
| OS493_030611-T1 | |||||
| Transcript |
| OS493_030611-T1 |
| Protein |
| OS493_030611-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01403 | Sema | Sema domain | Repeat | Interproscan |
| PF01437 | PSI | Plexin repeat | Family | Interproscan |
| PF01833 | TIG | IPT/TIG domain | Domain | Interproscan |
| PF08337 | Plexin_cytopl | Plexin cytoplasmic RasGAP domain | Domain | Interproscan |
| PF17960 | TIG_plexin | TIG domain | Domain | Interproscan |
| PF18020 | TIG_2 | TIG domain found in plexin | Domain | Interproscan |
| PF20170 | Plexin_RBD | Plexin cytoplasmic RhoGTPase-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001627 | Domain | Sema domain | Interproscan |
| IPR002165 | Repeat | Plexin repeat | Interproscan |
| IPR002909 | Domain | IPT domain | Interproscan |
| IPR008936 | Homologous_superfamily | Rho GTPase activation protein | Interproscan |
| IPR013548 | Domain | Plexin, cytoplasmic RasGAP domain | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR016201 | Domain | PSI domain | Interproscan |
| IPR031148 | Family | Plexin family | Interproscan |
| IPR036352 | Homologous_superfamily | Sema domain superfamily | Interproscan |
| IPR041019 | Domain | Plexin, TIG domain 1 | Interproscan |
| IPR041362 | Domain | Plexin, TIG domain 2 | Interproscan |
| IPR046800 | Domain | Plexin, cytoplasmic RhoGTPase-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22625 | PLEXIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002116 | Cellular Component | semaphorin receptor complex | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005887 | Cellular Component | plasma membrane | Interproscan |
| GO:0017154 | Molecular Function | semaphorin receptor activity | Interproscan |
| GO:0030334 | Biological Process | regulation of cell migration | Interproscan |
| GO:0071526 | Biological Process | semaphorin-plexin signaling pathway | Interproscan |
| GO:1902287 | Biological Process | semaphorin-plexin signaling pathway involved in axon guidance | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_030611-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
