Detailed information of OS493_030529-T1 in Lophelia pertusa

Genomic Location: scaffold_197:380325...396923
NR annotation: KAJ7354752.1, E3 ubiquitin-protein ligase Zswim2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8NEG5E3 ubiquitin-protein ligase ZSWIM2 OS=Homo sapiens OX=9606 GN=ZSWIM2 PE=1 SV=2
Q9D9X6E3 ubiquitin-protein ligase Zswim2 OS=Mus musculus OX=10090 GN=Zswim2 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR039903FamilyE3 ubiquitin-protein ligase Zswim2Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21540RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15716ZSWIM2; E3 ubiquitin-protein ligase ZSWIM2EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_030529-T1 global co-expression network
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