Detailed information of OS493_030452-T1 in Lophelia pertusa

Genomic Location: scaffold_196:214544...221821
NR annotation: KAJ7370700.1, protein 2 3 complex subunit [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8AVT9Actin-related protein 2/3 complex subunit 1A-A OS=Xenopus laevis OX=8355 GN=arpc1a-a PE=1 SV=1
Q9R0Q6Actin-related protein 2/3 complex subunit 1A OS=Mus musculus OX=10090 GN=Arpc1a PE=1 SV=1
A0A1L8EXB5Actin-related protein 2/3 complex subunit 1A-B OS=Xenopus laevis OX=8355 GN=arpc1a-b PE=3 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR017383FamilyActin-related protein 2/3 complex subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10709ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005885Cellular ComponentArp2/3 protein complexInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0034314Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05757ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B-Cytoskeleton proteinsko04812deepkoala

Expression pattern
 Expression trend for OS493_030452-T1 global co-expression network
TOP