Detailed information of OS493_030253-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_030253-T1-scaffold_192746666753945+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13374TPR_10Tetratricopeptide repeatRepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR052346FamilyProtein O-mannosyl-transferase TMTCInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR44227-Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000030Molecular Functionmannosyltransferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0035269Biological Processprotein O-linked mannosylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_030253-T1 global RNA-seq network
TOP