Detailed information of OS493_030221-T1 in Lophelia pertusa

Genomic Location: scaffold_192:324...10310
NR annotation: KAJ7324048.1, Rho guanine nucleotide exchange factor 4, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NR80Rho guanine nucleotide exchange factor 4 OS=Homo sapiens OX=9606 GN=ARHGEF4 PE=1 SV=3
Q5DU57Spermatogenesis-associated protein 13 OS=Mus musculus OX=10090 GN=Spata13 PE=1 SV=2
Q96N96Spermatogenesis-associated protein 13 OS=Homo sapiens OX=9606 GN=SPATA13 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR053086FamilyRhoGEF domain-containing proteinInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45834RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 9-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

Expression pattern
 Expression trend for OS493_030221-T1 global co-expression network
TOP