Detailed information of OS493_030077-T1 in Lophelia pertusa

Genomic Location: scaffold_189:355488...357371
NR annotation: KAJ7377266.1, hypothetical protein OS493_030077 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZUK0E3 ubiquitin-protein ligase rnf146 OS=Danio rerio OX=7955 GN=rnf146 PE=2 SV=1
C0HBT3E3 ubiquitin-protein ligase rnf146 OS=Salmo salar OX=8030 GN=rnf146 PE=2 SV=1
Q66JE4E3 ubiquitin-protein ligase rnf146 OS=Xenopus tropicalis OX=8364 GN=rnf146 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF02825WWEWWE domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR033509FamilyE3 ubiquitin-protein ligase RNF146Interproscan
IPR004170DomainWWE domainInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR044110DomainRNF146, RING finger, HC subclassInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13417UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016055Biological ProcessWnt signaling pathwayInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072572Molecular Functionpoly-ADP-D-ribose bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15700RNF146; E3 ubiquitin-protein ligase RNF146EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_030077-T1 global co-expression network
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