Detailed information of OS493_029920-T1 in Lophelia pertusa

Genomic Location: scaffold_186:630633...638225
NR annotation: KAJ7325369.1, hypothetical protein OS493_029920 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DG81Plastin-3 OS=Danio rerio OX=7955 GN=pls3 PE=2 SV=1
A7E3Q8Plastin-3 OS=Bos taurus OX=9913 GN=PLS3 PE=2 SV=1
P13797Plastin-3 OS=Homo sapiens OX=9606 GN=PLS3 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR039959FamilyFimbrin/PlastinInterproscan
IPR001715DomainCalponin homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0032432Cellular Componentactin filament bundleInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0051017Biological Processactin filament bundle assemblyInterproscan
GO:0051639Biological Processactin filament network formationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_029920-T1 global co-expression network
TOP