Detailed information of OS493_029856-T1 in Lophelia pertusa

Genomic Location: scaffold_185:584641...601441
NR annotation: KAJ7354850.1, DNA topoisomerase 2-alpha [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42130DNA topoisomerase 2-alpha OS=Gallus gallus OX=9031 GN=TOP2A PE=2 SV=2
P11388DNA topoisomerase 2-alpha OS=Homo sapiens OX=9606 GN=TOP2A PE=1 SV=3
O42131DNA topoisomerase 2-beta OS=Gallus gallus OX=9031 GN=TOP2B PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01751ToprimToprim domainFamilyInterproscan
PF00204DNA_gyraseBDNA gyrase BDomainInterproscan
PF00521DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan
PF16898TOPRIM_CC-terminal associated domain of TOPRIMFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006171DomainTOPRIM domainInterproscan
IPR013759Homologous_superfamilyDNA topoisomerase, type IIA, subunit B, C-terminalInterproscan
IPR013506DomainDNA topoisomerase, type IIA, subunit B, domain 2Interproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR050634FamilyDNA Topoisomerase II EnzymeInterproscan
IPR034157DomainDNA topoisomerase 2, TOPRIM domainInterproscan
IPR002205DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR001241FamilyDNA topoisomerase, type IIAInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR031660DomainC-terminal associated domain of TOPRIMInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR001154FamilyDNA topoisomerase II, eukaryotic-typeInterproscan
IPR013758Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR018522Conserved_siteDNA topoisomerase, type IIA, conserved siteInterproscan
IPR013760Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10169DNA TOPOISOMERASE/GYRASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000819Biological Processsister chromatid segregationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan

Expression pattern
 Expression trend for OS493_029856-T1 global co-expression network
TOP