Detailed information of OS493_029771-T1 in Lophelia pertusa

Genomic Location: scaffold_184:240424...247009
NR annotation: KAJ7370782.1, hypothetical protein OS493_029771 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O17449Tubulin beta-1 chain OS=Manduca sexta OX=7130 PE=2 SV=1
P41937Tubulin beta-4 chain OS=Caenorhabditis elegans OX=6239 GN=tbb-4 PE=3 SV=1
P52275Tubulin beta-2 chain OS=Caenorhabditis elegans OX=6239 GN=tbb-2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000217FamilyTubulinInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR002453FamilyBeta tubulinInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07375TUBB; tubulin beta-Exosomeko04147deepkoala

Expression pattern
 Expression trend for OS493_029771-T1 global co-expression network
TOP