Detailed information of OS493_029720-T1 in Lophelia pertusa

Genomic Location: scaffold_183:459386...460914
NR annotation: KAJ7377361.1, hypothetical protein OS493_029720 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UMQ3Homeobox protein BarH-like 2 OS=Homo sapiens OX=9606 GN=BARX2 PE=1 SV=3
O08686Homeobox protein BarH-like 2 OS=Mus musculus OX=10090 GN=Barx2 PE=2 SV=2
A8XJD0Homeobox protein ceh-30 OS=Caenorhabditis briggsae OX=6238 GN=ceh-30 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR050848FamilyHomeobox domain-containing transcription factorsInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24333HOMEO BOX HB9 LIKE A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09361BARX; BarH-like homeobox-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_029720-T1 global co-expression network
TOP