Detailed information of OS493_029602-T1 in Lophelia pertusa

Genomic Location: scaffold_181:481763...484875
NR annotation: KAJ7389703.1, hypothetical protein OS493_029602 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q75B82Non-histone chromosomal protein 6 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=NHP6 PE=3 SV=1
P07746High mobility group-T protein OS=Oncorhynchus mykiss OX=8022 PE=2 SV=2
Q6CVH3Non-histone chromosomal protein 6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=NHP6 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF09011HMG_box_2HMG-box domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008301Molecular FunctionDNA binding, bendingInterproscan

Expression pattern
 Expression trend for OS493_029602-T1 global co-expression network
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