Detailed information of OS493_029539-T1 in Lophelia pertusa

Genomic Location: scaffold_181:113138...118053
NR annotation: KAJ7389655.1, hypothetical protein OS493_029539 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92172Transcription factor VBP OS=Gallus gallus OX=9031 GN=TEF PE=1 SV=2
Q9JLC6Thyrotroph embryonic factor OS=Mus musculus OX=10090 GN=Tef PE=2 SV=1
P41224Thyrotroph embryonic factor OS=Rattus norvegicus OX=10116 GN=Tef PE=1 SV=3
 Gene family
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07716bZIP_2Basic region leucine zipperCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR040223FamilyPAR basic leucine zipper proteinInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11988THYROTROPH EMBRYONIC FACTOR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09057HLF; hepatic leukemia factor-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_029539-T1 global co-expression network
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