| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_029323-T1 | VALYL-TRNA SYNTHETASES | scaffold_177 | 356693 | 360455 | + |
| CDS | |||||
| OS493_029323-T1 | |||||
| Transcript |
| OS493_029323-T1 |
| Protein |
| OS493_029323-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08264 | Anticodon_1 | Anticodon-binding domain of tRNA ligase | Domain | Interproscan |
| PF10458 | Val_tRNA-synt_C | Valyl tRNA synthetase tRNA binding arm | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002303 | Family | Valine-tRNA ligase | Interproscan |
| IPR009080 | Homologous_superfamily | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding | Interproscan |
| IPR010978 | Homologous_superfamily | Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm | Interproscan |
| IPR013155 | Domain | Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding | Interproscan |
| IPR019499 | Domain | Valyl-tRNA synthetase, tRNA-binding arm | Interproscan |
| IPR037118 | Homologous_superfamily | Valyl-tRNA synthetase, tRNA-binding arm superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11946 | VALYL-TRNA SYNTHETASES | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0004832 | Molecular Function | valine-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| GO:0006438 | Biological Process | valyl-tRNA aminoacylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_029323-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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