Detailed information of OS493_029323-T1 in Lophelia pertusa

Genomic Location: scaffold_177:356693...360455
NR annotation: KAJ7377423.1, hypothetical protein OS493_029323 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49696Valine--tRNA ligase OS=Takifugu rubripes OX=31033 GN=vars1 PE=3 SV=1
Q04462Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars1 PE=2 SV=2
Q9Z1Q9Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF10458Val_tRNA-synt_CValyl tRNA synthetase tRNA binding armDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR019499DomainValyl-tRNA synthetase, tRNA-binding armInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR002303FamilyValine-tRNA ligaseInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR037118Homologous_superfamilyValyl-tRNA synthetase, tRNA-binding arm superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004832Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006438Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

Expression pattern
 Expression trend for OS493_029323-T1 global co-expression network
TOP