Detailed information of OS493_029321-T1 in Lophelia pertusa

Genomic Location: scaffold_177:336633...345616
NR annotation: KAJ7377421.1, Valine--tRNA ligase, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49696Valine--tRNA ligase OS=Takifugu rubripes OX=31033 GN=vars1 PE=3 SV=1
Q9Z1Q9Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1
P26640Valine--tRNA ligase OS=Homo sapiens OX=9606 GN=VARS1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR002303FamilyValine-tRNA ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0004832Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0006438Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

Expression pattern
 Expression trend for OS493_029321-T1 global co-expression network
TOP