Detailed information of OS493_029222-T1 in Lophelia pertusa

Genomic Location: scaffold_175:701146...702369
NR annotation: KAJ7389797.1, hypothetical protein OS493_029222 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR001496DomainSOCS box domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR050672FamilyF-box/SPRY and SOCS box protein familiesInterproscan
IPR003877DomainSPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_029222-T1 global co-expression network
TOP