Detailed information of OS493_029189-T1 in Lophelia pertusa

Genomic Location: scaffold_175:309816...316374
NR annotation: KAJ7389767.1, Homeobox protein Meis2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O00470Homeobox protein Meis1 OS=Homo sapiens OX=9606 GN=MEIS1 PE=1 SV=1
Q60954Homeobox protein Meis1 OS=Mus musculus OX=10090 GN=Meis1 PE=1 SV=1
Q99687Homeobox protein Meis3 OS=Homo sapiens OX=9606 GN=MEIS3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16493Meis_PKNOX_NN-terminal of Homeobox Meis and PKNOX1FamilyInterproscan
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR032453DomainHomeobox protein PKNOX/Meis, N-terminalInterproscan
IPR008422DomainHomeobox KN domainInterproscan
IPR050224FamilyThree Amino acid Loop Extension (TALE) homeoboxInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001228Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specificInterproscan
GO:0001654Biological Processeye developmentInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008284Biological Processpositive regulation of cell population proliferationInterproscan
GO:0009880Biological Processembryonic pattern specificationInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16670MEIS2; homeobox protein Meis2-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_029189-T1 global co-expression network
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