Detailed information of OS493_029150-T1 in Lophelia pertusa

Genomic Location: scaffold_174:649051...654337
NR annotation: KAJ7325722.1, Trans-acting T-cell-specific transcription factor GATA-3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P23770GATA-binding factor 2 OS=Xenopus laevis OX=8355 GN=gata2 PE=2 SV=1
P23824GATA-binding factor 2 OS=Gallus gallus OX=9031 GN=GATA2 PE=2 SV=1
O09100Endothelial transcription factor GATA-2 OS=Mus musculus OX=10090 GN=Gata2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00320GATAGATA zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR016374FamilyTranscription factor, GATA-2/3Interproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR039355FamilyTranscription factor GATAInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10071TRANSCRIPTION FACTOR GATA FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045165Biological Processcell fate commitmentInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_029150-T1 global co-expression network
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