Detailed information of OS493_028951-T1 in Lophelia pertusa

Genomic Location: scaffold_172:245351...250152
NR annotation: KAJ7370881.1, hypothetical protein OS493_028951 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01436NHLNHL repeatRepeatInterproscan
PF00024PAN_1PAN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001258RepeatNHL repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR050952FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24104E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

Expression pattern
 Expression trend for OS493_028951-T1 global co-expression network
TOP