Detailed information of OS493_028919-T1 in Lophelia pertusa

Genomic Location: scaffold_171:435582...446078
NR annotation: KAJ7377477.1, OTU domain, ubiquitin aldehyde binding [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96FW1Ubiquitin thioesterase OTUB1 OS=Homo sapiens OX=9606 GN=OTUB1 PE=1 SV=2
Q7TQI3Ubiquitin thioesterase OTUB1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=2
B2RYG6Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|OTU|OTU

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10275Peptidase_C65Peptidase C65 OtubainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019400FamilyPeptidase C65, otubainInterproscan
IPR016615FamilyUbiquitin thioesterase OtubainInterproscan
IPR003323DomainOTU domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR042468Homologous_superfamilyPeptidase C65, otubain, subdomain 1Interproscan
IPR042467Homologous_superfamilyPeptidase C65, otubain, subdomain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12931UBIQUITIN THIOLESTERASE PROTEIN OTUBInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0071108Biological Processprotein K48-linked deubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09602OTUB1; ubiquitin thioesterase protein OTUB1EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_028919-T1 global co-expression network
TOP