Detailed information of OS493_028809-T1 in Lophelia pertusa

Genomic Location: scaffold_169:432325...438939
NR annotation: KAJ7389840.1, Histone-lysine N-methyltransferase prdm9 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9Q3T6PR domain zinc finger protein 14 OS=Mus musculus OX=10090 GN=Prdm14 PE=1 SV=1
P14404Histone-lysine N-methyltransferase MECOM OS=Mus musculus OX=10090 GN=Mecom PE=1 SV=2
A2A935Histone-lysine N-methyltransferase PRDM16 OS=Mus musculus OX=10090 GN=Prdm16 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR044417DomainPRDM7/PRDM9, PR/SET domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14003TRANSCRIPTIONAL REPRESSOR PROTEIN YYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0031519Cellular ComponentPcG protein complexInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20796PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9EC:2.1.1.354
Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_028809-T1 global co-expression network
TOP