Detailed information of OS493_028737-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_028737-T1HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBERscaffold_168397217418585-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF05964FYRNF/Y-rich N-terminusFamilyInterproscan
PF05965FYRCF/Y rich C-terminusFamilyInterproscan
PF13771zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001214DomainSET domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR003888Conserved_siteFY-rich, N-terminalInterproscan
IPR003889Conserved_siteFY-rich, C-terminalInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR047219DomainHistone-lysine N-methyltransferase 2A/2B, SET domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45838HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0035097Cellular Componenthistone methyltransferase complexInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0051568Biological Processobsolete histone H3-K4 methylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_028737-T1 global RNA-seq network
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