Detailed information of OS493_028737-T1 in Lophelia pertusa

Genomic Location: scaffold_168:397217...418585
NR annotation: KAJ7326015.1, histone methyltransferase (H3-K4 specific) [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08550Histone-lysine N-methyltransferase 2B OS=Mus musculus OX=10090 GN=Kmt2b PE=1 SV=3
Q9UMN6Histone-lysine N-methyltransferase 2B OS=Homo sapiens OX=9606 GN=KMT2B PE=1 SV=1
Q03164Histone-lysine N-methyltransferase 2A OS=Homo sapiens OX=9606 GN=KMT2A PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13771zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan
PF05964FYRNF/Y-rich N-terminusFamilyInterproscan
PF05965FYRCF/Y rich C-terminusFamilyInterproscan
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR047219DomainHistone-lysine N-methyltransferase 2A/2B, SET domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR003888Conserved_siteFY-rich, N-terminalInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR003889Conserved_siteFY-rich, C-terminalInterproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45838HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0035097Cellular Componenthistone methyltransferase complexInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0051568Biological Processobsolete histone H3-K4 methylationInterproscan

Expression pattern
 Expression trend for OS493_028737-T1 global co-expression network
TOP