Detailed information of OS493_028433-T1 in Lophelia pertusa

Genomic Location: scaffold_164:186175...192703
NR annotation: KAJ7383355.1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P23228Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus OX=9031 GN=HMGCS1 PE=1 SV=1
P17425Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Hmgcs1 PE=1 SV=1
Q8JZK9Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcs1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01154HMG_CoA_synt_NHydroxymethylglutaryl-coenzyme A synthase N terminalDomainInterproscan
PF08540HMG_CoA_synt_CHydroxymethylglutaryl-coenzyme A synthase C terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016039Homologous_superfamilyThiolase-likeInterproscan
IPR013528DomainHydroxymethylglutaryl-coenzyme A synthase, N-terminalInterproscan
IPR000590Active_siteHydroxymethylglutaryl-coenzyme A synthase, active siteInterproscan
IPR013746DomainHydroxymethylglutaryl-coenzyme A synthase, C-terminal domainInterproscan
IPR010122FamilyHydroxymethylglutaryl-CoA synthase, eukaryoticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR433233-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0004421Molecular Functionhydroxymethylglutaryl-CoA synthase activityInterproscan
GO:0006084Biological Processacetyl-CoA metabolic processInterproscan
GO:0010142Biological Processfarnesyl diphosphate biosynthetic process, mevalonate pathwayInterproscan
GO:0008299Biological Processisoprenoid biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01641HMGCS; hydroxymethylglutaryl-CoA synthaseEC:2.3.3.10
PPAR signaling pathwayko03320deepkoala

Expression pattern
 Expression trend for OS493_028433-T1 global co-expression network
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