Detailed information of OS493_028432-T1 in Lophelia pertusa

Genomic Location: scaffold_164:164926...176367
NR annotation: KAJ7383354.1, Myb-like, SWIRM and MPN domains 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5VVJ2Deubiquitinase MYSM1 OS=Homo sapiens OX=9606 GN=MYSM1 PE=1 SV=1
Q5RGA4Histone H2A deubiquitinase MYSM1 OS=Danio rerio OX=7955 GN=mysm1 PE=2 SV=2
Q69Z66Deubiquitinase MYSM1 OS=Mus musculus OX=10090 GN=Mysm1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04433SWIRMSWIRM domainDomainInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR017884DomainSANT domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017930DomainMyb domainInterproscan
IPR007526DomainSWIRM domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44042DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11865MYSM1; histone H2A deubiquitinaseEC:3.4.19.-
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_028432-T1 global co-expression network
TOP