Detailed information of OS493_028423-T1 in Lophelia pertusa

Genomic Location: scaffold_164:45311...51093
NR annotation: KAJ7383345.1, hypothetical protein OS493_028423 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q18248Doublesex- and mab-3-related transcription factor dmd-4 OS=Caenorhabditis elegans OX=6239 GN=dmd-4 PE=1 SV=2
P83758Doublesex- and mab-3-related transcription factor 3a OS=Danio rerio OX=7955 GN=dmrt3a PE=1 SV=2
Q2MJB4Doublesex- and mab-3-related transcription factor A2 OS=Xenopus laevis OX=8355 GN=dmrta2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00751DMDM DNA binding domainFamilyInterproscan
PF03474DMADMRTA motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001275DomainDM DNA-binding domainInterproscan
IPR003892DomainUbiquitin system component CUEInterproscan
IPR036407Homologous_superfamilyDM DNA-binding domain superfamilyInterproscan
IPR026607FamilyDMRT familyInterproscan
IPR005173DomainDMRTA motifInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12322DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007548Biological Processsex differentiationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19491DMRT4_5, DMRTA; doublesex- and mab-3-related transcription factor 4/5-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_028423-T1 global co-expression network
TOP