Detailed information of OS493_028236-T1 in Lophelia pertusa

Genomic Location: scaffold_160:820933...851144
NR annotation: KAJ7371072.1, E3 ubiquitin-protein ligase ubr1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IWV8E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN=UBR2 PE=1 SV=1
Q6WKZ8E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=2
Q8IWV7E3 ubiquitin-protein ligase UBR1 OS=Homo sapiens OX=9606 GN=UBR1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR042065Homologous_superfamilyE3 ubiquitin-protein ligase ELL-likeInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR039164FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071596Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan

Expression pattern
 Expression trend for OS493_028236-T1 global co-expression network
TOP