Detailed information of OS493_028034-T1 in Lophelia pertusa

Genomic Location: scaffold_157:320156...321621
NR annotation: KAJ7389980.1, E3 ubiquitin-protein ligase march4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8TCQ1E3 ubiquitin-protein ligase MARCHF1 OS=Homo sapiens OX=9606 GN=MARCHF1 PE=1 SV=1
Q6NZQ8E3 ubiquitin-protein ligase MARCHF1 OS=Mus musculus OX=10090 GN=Marchf1 PE=1 SV=2
Q68FA7E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX=8364 GN=marchf3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12906RINGvRING-variant domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011016DomainZinc finger, RING-CH-typeInterproscan
IPR046356FamilyE3 ubiquitin-protein ligase MARCHF4/9/11Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46053E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

Expression pattern
 Expression trend for OS493_028034-T1 global co-expression network
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