Detailed information of OS493_027862-T1 in Lophelia pertusa

Genomic Location: scaffold_154:826641...833049
NR annotation: KAJ7371173.1, Ribonuclease H2 subunit A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2TBT5Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1
Q9CWY8Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2
Q5U209Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01351RNase_HIIRibonuclease HIIFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR023160Homologous_superfamilyRibonuclease HII, helix-loop-helix cap domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR024567DomainRibonuclease HII/HIII domainInterproscan
IPR004649FamilyRibonuclease H2, subunit AInterproscan
IPR001352FamilyRibonuclease HII/HIIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10954RIBONUCLEASE H2 SUBUNIT AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0016070Biological ProcessRNA metabolic processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0032299Cellular Componentribonuclease H2 complexInterproscan
GO:0043137Biological ProcessDNA replication, removal of RNA primerInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10743RNASEH2A; ribonuclease H2 subunit AEC:3.1.26.4
DNA replication proteinsko03032deepkoala

Expression pattern
 Expression trend for OS493_027862-T1 global co-expression network
TOP