Detailed information of OS493_027754-T1 in Lophelia pertusa

Genomic Location: scaffold_153:609653...666581
NR annotation: KAJ7377675.1, Stabilin-2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8R4U0Stabilin-2 OS=Mus musculus OX=10090 GN=Stab2 PE=1 SV=1
Q9NY15Stabilin-1 OS=Homo sapiens OX=9606 GN=STAB1 PE=1 SV=3
Q8R4Y4Stabilin-1 OS=Mus musculus OX=10090 GN=Stab1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF02469FasciclinFasciclin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR036378Homologous_superfamilyFAS1 domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000782DomainFAS1 domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR051146FamilyPhosphatidylserine Receptors and Protein Disulfide IsomerasesInterproscan
IPR024731DomainEGF domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24038STABILINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19013STAB2, HARE; stabilin-2-Glycosaminoglycan binding proteinsko00536deepkoala

Expression pattern
 Expression trend for OS493_027754-T1 global co-expression network
TOP