Gene detail

Detailed information of OS493_027610-T1 in Lophelia pertusa

Genomic Location: scaffold_152:82522...95249
NR annotation: KAJ7383451.1, THO complex subunit 3 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96J01	THO complex subunit 3 OS=Homo sapiens OX=9606 GN=THOC3 PE=1 SV=1
Q8VE80	THO complex subunit 3 OS=Mus musculus OX=10090 GN=Thoc3 PE=2 SV=1
Q29RH4	THO complex subunit 3 OS=Bos taurus OX=9913 GN=THOC3 PE=2 SV=1

Gene family

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF07676	PD40	WD40-like Beta Propeller Repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR040132	Family	TREX component Tex1/THOC3	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011659	Repeat	WD40-like beta propeller	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22839	THO COMPLEX SUBUNIT 3 THO3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000445	Cellular Component	THO complex part of transcription export complex	Interproscan
GO:0006406	Biological Process	mRNA export from nucleus	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18643	KATNB1; katanin p80 WD40 repeat-containing subunit B1	-	Cytoskeleton proteins	ko04812	deepkoala

Expression pattern